Index of /jen/jan2019/secondpass_clump_dupremoval

[ICO]NameLast modifiedSizeDescription

[PARENTDIR]Parent Directory  -  
[   ]hs1D_53_sorted.bed2019-02-01 17:03 4.7G 
[   ]hs1D_53_sorted.bam.bai2019-02-01 16:53 15K 
[   ]hs1D_53_sorted.bam2019-02-01 16:51 2.8G 
[   ]hs1C_52_sorted.bed2019-02-01 16:01 4.9G 
[   ]hs1C_52_sorted.bam.bai2019-02-01 15:49 16K 
[   ]hs1C_52_sorted.bam2019-02-01 15:47 3.1G 
[   ]hs1B_51_sorted.bed2019-02-01 14:53 5.4G 
[   ]hs1B_51_sorted.bam.bai2019-02-01 14:40 16K 
[   ]hs1B_51_sorted.bam2019-02-01 14:37 3.6G 
[   ]hs1A_50_sorted.bed2019-02-01 13:36 5.1G 
[   ]hs1A_50_sorted.bam.bai2019-02-01 13:24 18K 
[   ]hs1A_50_sorted.bam2019-02-01 13:21 3.4G 
[TXT]samtobam.pl2019-02-01 12:22 303  
[   ]hs2unconc1D_53.22019-01-30 16:32 3.5G 
[   ]hs1D_53.sam2019-01-30 16:32 21G 
[   ]hs2unconc1D_53.12019-01-30 16:32 2.6G 
[   ]novel1D_53.bed2019-01-30 16:32 5.2K 
[   ]nomixed5k.align.notes2019-01-30 16:32 1.5K 
[   ]hs2unmapped1D_532019-01-30 15:28 0  
[   ]hs1C_52.sam2019-01-30 15:27 22G 
[   ]hs2unconc1C_52.22019-01-30 15:27 3.5G 
[   ]hs2unconc1C_52.12019-01-30 15:27 2.6G 
[   ]novel1C_52.bed2019-01-30 15:27 6.8K 
[   ]hs2unmapped1C_522019-01-30 14:22 0  
[   ]hs1B_51.sam2019-01-30 14:22 24G 
[   ]hs2unconc1B_51.22019-01-30 14:22 3.8G 
[   ]novel1B_51.bed2019-01-30 14:22 7.9K 
[   ]hs2unconc1B_51.12019-01-30 14:22 2.8G 
[   ]hs2unmapped1B_512019-01-30 12:55 0  
[   ]hs1A_50.sam2019-01-30 12:54 23G 
[   ]hs2unconc1A_50.22019-01-30 12:54 3.9G 
[   ]hs2unconc1A_50.12019-01-30 12:54 2.9G 
[   ]novel1A_50.bed2019-01-30 12:54 9.5K 
[   ]hs2unmapped1A_502019-01-30 11:42 0  
[   ]nomixed5k.1.log2019-01-30 11:42 0  
[   ]raphisat22019-01-30 11:42 1.6K 
[   ]53.cov2019-01-24 16:57 295K 
[   ]52.cov2019-01-24 16:31 295K 
[   ]tmp.fa2019-01-24 16:28 52  
[   ]all.fa2019-01-24 16:28 8.8M 
[TXT]makeallfa.pl2019-01-24 16:27 967  
[   ]51.cov2019-01-24 16:04 295K 
[   ]50.cov2019-01-24 15:36 295K 
[   ]all.bed2019-01-24 15:10 277K 
[   ]coverage12019-01-24 15:09 213  
[   ]allpos.bed2019-01-24 14:56 141K 
[   ]allneg.bed2019-01-24 14:56 136K 
[TXT]makeexonsintrons.pl2019-01-24 14:56 1.2K 
[   ]ares_sc3_isoforms.bed2019-01-24 14:35 393K 
[TXT]2whichones.pl2019-01-24 14:14 1.6K 
[TXT]solannotations.pl2019-01-24 14:13 1.3K 
[TXT]005bam.txt2019-01-23 10:24 1.9K 
[   ]hs1D_53_sub05.bam.bai2019-01-23 10:22 11K 
[   ]hs1C_52_sub05.bam.bai2019-01-23 10:22 10K 
[   ]hs1B_51_sub05.bam.bai2019-01-23 10:22 10K 
[   ]hs1A_50_sub05.bam.bai2019-01-23 10:22 11K 
[   ]hs1D_53_sub05.bam2019-01-23 10:22 16M 
[   ]hs1C_52_sub05.bam2019-01-23 10:20 18M 
[   ]hs1B_51_sub05.bam2019-01-23 10:18 21M 
[   ]hs1A_50_sub05.bam2019-01-23 10:15 19M 
[   ]sub2019-01-23 10:12 399  
[   ]1D_53_3end_pos.bedgraph2019-01-22 10:40 813K 
[TXT]track.txt2019-01-22 10:40 40  
[   ]1D_53_3end_neg.bedgraph2019-01-22 10:40 606K 
[   ]1C_52_3end_pos.bedgraph2019-01-22 10:40 830K 
[   ]1C_52_3end_neg.bedgraph2019-01-22 10:40 614K 
[   ]1B_51_3end_pos.bedgraph2019-01-22 10:40 822K 
[   ]1B_51_3end_neg.bedgraph2019-01-22 10:40 611K 
[   ]1A_50_3end_pos.bedgraph2019-01-22 10:40 881K 
[   ]1A_50_3end_neg.bedgraph2019-01-22 10:40 685K 
[TXT]addtrack.pl2019-01-22 10:40 475  
[TXT]reverse.pl2019-01-22 10:29 477  
[   ]mmmv2019-01-22 10:21 376  
[TXT]subbam.txt2019-01-22 10:18 1.9K 
[   ]hs1D_53_sub.bam.bai2019-01-22 10:02 13K 
[   ]hs1C_52_sub.bam.bai2019-01-22 10:02 12K 
[   ]hs1B_51_sub.bam.bai2019-01-22 10:02 12K 
[   ]hs1A_50_sub.bam.bai2019-01-22 10:02 12K 
[   ]hs1D_53_sub.bam2019-01-22 10:02 32M 
[   ]hs1C_52_sub.bam2019-01-22 09:59 35M 
[   ]hs1B_51_sub.bam2019-01-22 09:57 40M 
[   ]hs1A_50_sub.bam2019-01-22 09:54 38M 
[   ]Pair_1.bedgraph2019-01-20 17:50 1.5M 
[   ]Pair_1_short.bed2019-01-20 17:44 688M 
[   ]Pair_1.bed2019-01-20 17:41 2.9G 
[   ]Pair_1.bam2019-01-20 17:36 1.2G 
[TXT]generate_3end_bedgraph2.sh2019-01-20 16:11 2.7K 
[TXT]generate_3end_bedgraph3.sh2019-01-20 16:10 2.7K 
[TXT]generate_3end_bedgraph4.sh2019-01-20 16:10 2.7K 
[TXT]generate_3end_bedgraph.sh2019-01-20 16:09 2.7K 
[   ]genwrap2019-01-20 16:08 119  
[   ]align.notes2019-01-19 14:25 2.5K 
[   ]1.log2019-01-19 09:31 0  
[   ]trim1D_S53_R1.fastq2019-01-19 09:27 6.9G 
[   ]trim1C_S52_R1.fastq2019-01-19 09:07 7.2G 
[   ]trim1B_S51_R1.fastq2019-01-19 08:45 7.9G 
[   ]trim1A_S50_R1.fastq2019-01-19 08:23 7.6G 
[   ]runtrim2019-01-19 08:02 362  
[   ]1D_S53_R2.fastq2019-01-18 20:42 9.4G 
[   ]1D_S53_R1.fastq2019-01-18 20:42 9.4G 
[   ]1C_S52_R2.fastq2019-01-18 18:44 9.7G 
[   ]1C_S52_R1.fastq2019-01-18 18:44 9.7G 
[   ]1B_S51_R2.fastq2019-01-18 16:34 11G 
[   ]1B_S51_R1.fastq2019-01-18 16:34 11G 
[   ]trimandalign2019-01-18 15:26 2.1K 
[TXT]1A_S50_R2_fastqc.html2019-01-18 15:23 333K 
[   ]1A_S50_R2_fastqc.zip2019-01-18 15:23 473K 
[TXT]1A_S50_R1_fastqc.html2019-01-18 15:00 311K 
[   ]1A_S50_R1_fastqc.zip2019-01-18 15:00 440K 
[   ]1A_S50_R1.fastq2019-01-18 13:23 10G 
[   ]1A_S50_R2.fastq2019-01-18 13:23 10G 
[   ]clump2019-01-18 11:47 721  

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