Index of /jen/april2021

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[DIR]demultiplexed_trimmed/2021-02-09 16:57 -  
[ ]someoldersmitdata.zip2021-04-29 13:22 380K 
[ ]0aar9-1pro-term.dna2021-04-29 13:22 47K 
[ ]aar_I_1_2pro-term.dna2021-04-29 13:22 46K 
[ ]aar_I_2_4-5_pro-term.dna2021-04-29 13:22 30K 
[ ]demultiplexed_trimmed.zip2021-04-29 13:22 349K 
[ ]raphisat22021-04-29 13:37 1.5K 
[ ]aar_I_2_4-5_pro-term.fa2021-05-03 08:50 30K 
[ ]aar_I_1_2pro-term.fa2021-05-03 08:51 46K 
[ ]0aar9-1pro-term.fa2021-05-03 08:51 47K 
[DIR]indexes/2021-05-03 12:14 -  
[TXT]groups.txt2021-05-03 12:31 273  
[ ]splrepsplit.fa2021-05-03 13:31 6.0K 
[ ]splrep_notes2021-05-03 13:36 2.7K 
[TXT]genomes.txt2021-05-03 13:39 158  
[ ]splrep.fa2021-05-03 14:08 7.6K 
[ ]splrep.2bit2021-05-03 14:09 2.6K 
[ ]out.tb2021-05-03 14:13 12  
[ ]sss2021-05-03 14:19 645  
[ ]baserep.bb2021-05-03 14:19 19K 
[DIR]R/2021-05-18 13:47 -  
[ ]chrom.sizes2021-05-27 15:18 12  
[TXT]wraphisat.pl2021-05-28 10:45 636  
[ ]hisatnotes2021-05-28 10:46 1.9K 
[TXT]basebam.txt2021-05-28 11:00 1.8K 
[TXT]srtracks.txt2021-05-28 11:00 1.8K 
[TXT]splicingReporter.html2021-05-28 11:01 2.8K 
[DIR]firstdemultiplexed_trimmed_minimap/2021-05-28 12:29 -  
[DIR]fromhisat_genome/2021-05-28 12:33 -  
[DIR]demultiplexed_trimmed_minimap/2021-05-28 12:43 -  
[ ]b4.test2021-05-28 13:44 276  
[ ]b4.test.bedgraph2021-05-28 13:44 130  
[ ]in.test2021-05-28 13:44 282  
[ ]ex.test2021-05-28 13:44 564  
[ ]in.test.bedgraph2021-05-28 13:44 130  
[ ]ex.test.bedgraph2021-05-28 13:44 244  
[TXT]splitandintron.pl2021-05-28 13:44 1.7K 
[ ]in.sr_2AB_1_BC1_sorted.bed.bw2021-05-28 14:58 41K 
[ ]in.sr_2AB_2_BC2_sorted.bed.bw2021-05-28 14:58 43K 
[ ]in.sr_2AB_T_BC3_sorted.bed.bw2021-05-28 14:58 39K 
[ ]in.sr_45_2_BC5_sorted.bed.bw2021-05-28 14:58 42K 
[ ]in.sr_45a_1_BC4_sorted.bed.bw2021-05-28 14:58 44K 
[ ]in.sr_45b_1_BC6_sorted.bed.bw2021-05-28 14:58 44K 
[ ]in.sr_91a_1_BC7_sorted.bed.bw2021-05-28 14:58 41K 
[ ]in.sr_91a_2_BC8_sorted.bed.bw2021-05-28 14:59 43K 
[ ]in.sr_91b_1_BC9_sorted.bed.bw2021-05-28 14:59 40K 
[ ]in.sr_91b_2_BC10_sorted.bed.bw2021-05-28 14:59 44K 
[TXT]hub.txt2021-05-28 16:48 210  
[TXT]maxintorn.pl2021-06-01 14:01 792  
[ ]co200.sr_2AB_1_BC1_sorted.bed2021-06-01 14:01 179K 
[TXT]samtobamtobed.pl2021-06-01 14:03 765  
[ ]sr_2AB_1_BC1_sorted.bam2021-06-01 14:12 74K 
[ ]sr_2AB_1_BC1_sorted.bam.bai2021-06-01 14:12 96  
[ ]sr_2AB_1_BC1_sorted.bed2021-06-01 14:12 175K 
[ ]sr_2AB_2_BC2_sorted.bam2021-06-01 14:12 173K 
[ ]sr_2AB_2_BC2_sorted.bam.bai2021-06-01 14:12 96  
[ ]sr_2AB_2_BC2_sorted.bed2021-06-01 14:12 407K 
[ ]sr_2AB_T_BC3_sorted.bam2021-06-01 14:12 10K 
[ ]sr_2AB_T_BC3_sorted.bam.bai2021-06-01 14:12 96  
[ ]sr_2AB_T_BC3_sorted.bed2021-06-01 14:12 15K 
[ ]sr_45_2_BC5_sorted.bam2021-06-01 14:12 75K 
[ ]sr_45_2_BC5_sorted.bam.bai2021-06-01 14:12 96  
[ ]sr_45_2_BC5_sorted.bed2021-06-01 14:12 170K 
[ ]sr_45a_1_BC4_sorted.bam2021-06-01 14:12 156K 
[ ]sr_45a_1_BC4_sorted.bam.bai2021-06-01 14:12 96  
[ ]sr_45a_1_BC4_sorted.bed2021-06-01 14:12 429K 
[ ]sr_45b_1_BC6_sorted.bam2021-06-01 14:12 153K 
[ ]sr_45b_1_BC6_sorted.bam.bai2021-06-01 14:12 96  
[ ]sr_45b_1_BC6_sorted.bed2021-06-01 14:12 368K 
[ ]sr_91a_1_BC7_sorted.bam2021-06-01 14:12 18K 
[ ]sr_91a_1_BC7_sorted.bam.bai2021-06-01 14:12 96  
[ ]sr_91a_1_BC7_sorted.bed2021-06-01 14:12 42K 
[ ]sr_91a_2_BC8_sorted.bam2021-06-01 14:12 113K 
[ ]sr_91a_2_BC8_sorted.bam.bai2021-06-01 14:12 96  
[ ]sr_91a_2_BC8_sorted.bed2021-06-01 14:12 294K 
[ ]sr_91b_1_BC9_sorted.bam2021-06-01 14:12 32K 
[ ]sr_91b_1_BC9_sorted.bam.bai2021-06-01 14:12 96  
[ ]sr_91b_1_BC9_sorted.bed2021-06-01 14:12 79K 
[ ]sr_91b_2_BC10_sorted.bam2021-06-01 14:12 188K 
[ ]sr_91b_2_BC10_sorted.bam.bai2021-06-01 14:12 96  
[ ]sr_91b_2_BC10_sorted.bed2021-06-01 14:12 427K 
[ ]b4.sr_2AB_1_BC1_sorted.bed2021-06-01 14:12 136K 
[ ]b4.sr_2AB_1_BC1_sorted.bed.bedgraph2021-06-01 14:12 12K 
[ ]in.sr_2AB_1_BC1_sorted.bed2021-06-01 14:12 22K 
[ ]in.sr_2AB_1_BC1_sorted.bed.bedgraph2021-06-01 14:12 308  
[ ]ex.sr_2AB_1_BC1_sorted.bed2021-06-01 14:12 161K 
[ ]ex.sr_2AB_1_BC1_sorted.bed.bedgraph2021-06-01 14:12 12K 
[ ]b4.sr_2AB_2_BC2_sorted.bed2021-06-01 14:12 315K 
[ ]b4.sr_2AB_2_BC2_sorted.bed.bedgraph2021-06-01 14:12 20K 
[ ]in.sr_2AB_2_BC2_sorted.bed2021-06-01 14:12 72K 
[ ]in.sr_2AB_2_BC2_sorted.bed.bedgraph2021-06-01 14:12 336  
[ ]ex.sr_2AB_2_BC2_sorted.bed2021-06-01 14:12 394K 
[ ]ex.sr_2AB_2_BC2_sorted.bed.bedgraph2021-06-01 14:12 20K 
[ ]b4.sr_2AB_T_BC3_sorted.bed2021-06-01 14:12 12K 
[ ]b4.sr_2AB_T_BC3_sorted.bed.bedgraph2021-06-01 14:12 2.0K 
[ ]in.sr_2AB_T_BC3_sorted.bed2021-06-01 14:12 4.8K 
[ ]in.sr_2AB_T_BC3_sorted.bed.bedgraph2021-06-01 14:12 246  
[ ]ex.sr_2AB_T_BC3_sorted.bed2021-06-01 14:12 17K 
[ ]ex.sr_2AB_T_BC3_sorted.bed.bedgraph2021-06-01 14:12 2.2K 
[ ]b4.sr_45_2_BC5_sorted.bed2021-06-01 14:12 130K 
[ ]b4.sr_45_2_BC5_sorted.bed.bedgraph2021-06-01 14:12 13K 
[ ]in.sr_45_2_BC5_sorted.bed2021-06-01 14:12 46K 
[ ]in.sr_45_2_BC5_sorted.bed.bedgraph2021-06-01 14:12 316  
[ ]ex.sr_45_2_BC5_sorted.bed2021-06-01 14:12 179K 
[ ]ex.sr_45_2_BC5_sorted.bed.bedgraph2021-06-01 14:12 13K 
[ ]b4.sr_45a_1_BC4_sorted.bed2021-06-01 14:12 330K 
[ ]b4.sr_45a_1_BC4_sorted.bed.bedgraph2021-06-01 14:12 20K 
[ ]in.sr_45a_1_BC4_sorted.bed2021-06-01 14:12 115K 
[ ]in.sr_45a_1_BC4_sorted.bed.bedgraph2021-06-01 14:12 416  
[ ]ex.sr_45a_1_BC4_sorted.bed2021-06-01 14:12 452K 
[ ]ex.sr_45a_1_BC4_sorted.bed.bedgraph2021-06-01 14:12 20K 
[ ]b4.sr_45b_1_BC6_sorted.bed2021-06-01 14:12 283K 
[ ]b4.sr_45b_1_BC6_sorted.bed.bedgraph2021-06-01 14:12 20K 
[ ]in.sr_45b_1_BC6_sorted.bed2021-06-01 14:12 94K 
[ ]in.sr_45b_1_BC6_sorted.bed.bedgraph2021-06-01 14:12 437  
[ ]ex.sr_45b_1_BC6_sorted.bed2021-06-01 14:12 384K 
[ ]ex.sr_45b_1_BC6_sorted.bed.bedgraph2021-06-01 14:12 20K 
[ ]b4.sr_91a_1_BC7_sorted.bed2021-06-01 14:12 32K 
[ ]b4.sr_91a_1_BC7_sorted.bed.bedgraph2021-06-01 14:12 4.5K 
[ ]in.sr_91a_1_BC7_sorted.bed2021-06-01 14:12 21K 
[ ]in.sr_91a_1_BC7_sorted.bed.bedgraph2021-06-01 14:12 210  
[ ]ex.sr_91a_1_BC7_sorted.bed2021-06-01 14:12 53K 
[ ]ex.sr_91a_1_BC7_sorted.bed.bedgraph2021-06-01 14:12 4.5K 
[ ]b4.sr_91a_2_BC8_sorted.bed2021-06-01 14:12 228K 
[ ]b4.sr_91a_2_BC8_sorted.bed.bedgraph2021-06-01 14:12 17K 
[ ]in.sr_91a_2_BC8_sorted.bed2021-06-01 14:12 41K 
[ ]in.sr_91a_2_BC8_sorted.bed.bedgraph2021-06-01 14:12 314  
[ ]ex.sr_91a_2_BC8_sorted.bed2021-06-01 14:12 274K 
[ ]ex.sr_91a_2_BC8_sorted.bed.bedgraph2021-06-01 14:12 17K 
[ ]b4.sr_91b_1_BC9_sorted.bed2021-06-01 14:12 59K 
[ ]b4.sr_91b_1_BC9_sorted.bed.bedgraph2021-06-01 14:12 6.6K 
[ ]in.sr_91b_1_BC9_sorted.bed2021-06-01 14:12 46K 
[ ]in.sr_91b_1_BC9_sorted.bed.bedgraph2021-06-01 14:12 290  
[ ]ex.sr_91b_1_BC9_sorted.bed2021-06-01 14:12 106K 
[ ]ex.sr_91b_1_BC9_sorted.bed.bedgraph2021-06-01 14:12 6.7K 
[ ]b4.sr_91b_2_BC10_sorted.bed2021-06-01 14:12 330K 
[ ]b4.sr_91b_2_BC10_sorted.bed.bedgraph2021-06-01 14:12 22K 
[ ]in.sr_91b_2_BC10_sorted.bed2021-06-01 14:12 88K 
[ ]in.sr_91b_2_BC10_sorted.bed.bedgraph2021-06-01 14:12 416  
[ ]ex.sr_91b_2_BC10_sorted.bed2021-06-01 14:12 425K 
[ ]ex.sr_91b_2_BC10_sorted.bed.bedgraph2021-06-01 14:12 23K 
[ ]test.bed2021-06-09 13:46 713  
[ ]2.sr_2AB_1_BC1_sorted.bed.dat2021-06-09 13:52 165  
[ ]2.ex_frac.sr_2AB_1_BC1_sorted.bed.bw2021-06-09 13:52 18K 
[ ]2.ex_frac.sr_2AB_1_BC1_sorted.bed.wig2021-06-09 13:52 136  
[ ]2.in_frac.sr_2AB_1_BC1_sorted.bed.bw2021-06-09 13:52 18K 
[ ]2.in_frac.sr_2AB_1_BC1_sorted.bed.wig2021-06-09 13:52 138  
[TXT]2allfractracks.txt2021-06-09 13:52 247  
[TXT]trackDb_wex.txt2021-06-09 14:04 7.1K 
[TXT]trackDb.txt2021-06-09 14:05 4.6K 
[ ]1SMIT_processing_local.R2021-06-09 15:57 21K 
[ ]2SMIT_processing_local.R2021-06-09 15:58 21K 
[ ]my1SMIT.R2021-06-10 10:06 21K 
[TXT]trackDb_wsj3.txt2021-06-10 10:11 7.1K 
[TXT]hub_wsj3.txt2021-06-10 10:12 215  
[TXT]genomes_wsj3.txt2021-06-10 10:12 163  
[ ]yy2021-06-10 13:07 1.7K 
[ ]ex_frac.sr_2AB_1_BC1_sorted.bed.wig2021-06-10 13:39 38K 
[ ]in_frac.sr_2AB_1_BC1_sorted.bed.bw2021-06-10 13:39 40K 
[ ]in_frac.sr_2AB_1_BC1_sorted.bed.wig2021-06-10 13:39 38K 
[ ]ex_frac.sr_2AB_1_BC1_sorted.bed.bw2021-06-10 13:39 40K 
[ ]ex_frac.sr_2AB_2_BC2_sorted.bed.wig2021-06-10 13:39 38K 
[ ]in_frac.sr_2AB_2_BC2_sorted.bed.wig2021-06-10 13:39 39K 
[ ]in_frac.sr_2AB_2_BC2_sorted.bed.bw2021-06-10 13:39 41K 
[ ]ex_frac.sr_2AB_2_BC2_sorted.bed.bw2021-06-10 13:39 41K 
[ ]ex_frac.sr_2AB_T_BC3_sorted.bed.wig2021-06-10 13:39 30K 
[ ]in_frac.sr_2AB_T_BC3_sorted.bed.wig2021-06-10 13:39 30K 
[ ]ex_frac.sr_2AB_T_BC3_sorted.bed.bw2021-06-10 13:39 39K 
[ ]in_frac.sr_2AB_T_BC3_sorted.bed.bw2021-06-10 13:39 39K 
[ ]ex_frac.sr_45_2_BC5_sorted.bed.wig2021-06-10 13:39 37K 
[ ]in_frac.sr_45_2_BC5_sorted.bed.wig2021-06-10 13:39 37K 
[ ]ex_frac.sr_45_2_BC5_sorted.bed.bw2021-06-10 13:39 40K 
[ ]in_frac.sr_45_2_BC5_sorted.bed.bw2021-06-10 13:39 40K 
[ ]ex_frac.sr_45a_1_BC4_sorted.bed.wig2021-06-10 13:39 39K 
[ ]in_frac.sr_45a_1_BC4_sorted.bed.wig2021-06-10 13:39 39K 
[ ]in_frac.sr_45a_1_BC4_sorted.bed.bw2021-06-10 13:39 41K 
[ ]ex_frac.sr_45a_1_BC4_sorted.bed.bw2021-06-10 13:39 41K 
[ ]ex_frac.sr_45b_1_BC6_sorted.bed.wig2021-06-10 13:39 39K 
[ ]in_frac.sr_45b_1_BC6_sorted.bed.wig2021-06-10 13:39 39K 
[ ]ex_frac.sr_45b_1_BC6_sorted.bed.bw2021-06-10 13:39 41K 
[ ]in_frac.sr_45b_1_BC6_sorted.bed.bw2021-06-10 13:39 41K 
[ ]ex_frac.sr_91a_1_BC7_sorted.bed.wig2021-06-10 13:39 33K 
[ ]in_frac.sr_91a_1_BC7_sorted.bed.wig2021-06-10 13:39 33K 
[ ]in_frac.sr_91a_1_BC7_sorted.bed.bw2021-06-10 13:39 39K 
[ ]ex_frac.sr_91a_1_BC7_sorted.bed.bw2021-06-10 13:39 39K 
[ ]ex_frac.sr_91a_2_BC8_sorted.bed.wig2021-06-10 13:39 38K 
[ ]in_frac.sr_91a_2_BC8_sorted.bed.wig2021-06-10 13:39 39K 
[ ]ex_frac.sr_91a_2_BC8_sorted.bed.bw2021-06-10 13:39 41K 
[ ]in_frac.sr_91a_2_BC8_sorted.bed.bw2021-06-10 13:39 41K 
[ ]ex_frac.sr_91b_1_BC9_sorted.bed.wig2021-06-10 13:39 37K 
[ ]in_frac.sr_91b_1_BC9_sorted.bed.wig2021-06-10 13:39 37K 
[ ]in_frac.sr_91b_1_BC9_sorted.bed.bw2021-06-10 13:39 40K 
[ ]ex_frac.sr_91b_1_BC9_sorted.bed.bw2021-06-10 13:39 40K 
[ ]ex_frac.sr_91b_2_BC10_sorted.bed.wig2021-06-10 13:39 39K 
[ ]in_frac.sr_91b_2_BC10_sorted.bed.wig2021-06-10 13:39 39K 
[ ]in_frac.sr_91b_2_BC10_sorted.bed.bw2021-06-10 13:39 41K 
[ ]ex_frac.sr_91b_2_BC10_sorted.bed.bw2021-06-10 13:39 41K 
[TXT]fracscore.pl2021-06-10 13:39 2.7K 
[TXT]justendfracscore.pl2021-06-10 16:58 3.6K 
[ ]sj3_frac.sr_2AB_1_BC1_sorted.bed.wig2021-06-10 16:58 30K 
[ ]sr_2AB_1_BC1_sorted.bed.dat2021-06-10 16:58 91K 
[ ]sj3_frac.sr_2AB_1_BC1_sorted.bed.bw2021-06-10 16:58 40K 
[ ]sj3_frac.sr_2AB_2_BC2_sorted.bed.wig2021-06-10 16:58 34K 
[ ]sr_2AB_2_BC2_sorted.bed.dat2021-06-10 16:58 95K 
[ ]sj3_frac.sr_2AB_2_BC2_sorted.bed.bw2021-06-10 16:58 41K 
[ ]sj3_frac.sr_2AB_T_BC3_sorted.bed.wig2021-06-10 16:58 21K 
[ ]sr_2AB_T_BC3_sorted.bed.dat2021-06-10 16:58 80K 
[ ]sj3_frac.sr_2AB_T_BC3_sorted.bed.bw2021-06-10 16:58 38K 
[ ]sr_45_2_BC5_sorted.bed.dat2021-06-10 16:58 93K 
[ ]sj3_frac.sr_45_2_BC5_sorted.bed.bw2021-06-10 16:58 41K 
[ ]sj3_frac.sr_45a_1_BC4_sorted.bed.wig2021-06-10 16:59 35K 
[ ]sr_45a_1_BC4_sorted.bed.dat2021-06-10 16:59 96K 
[ ]sj3_frac.sr_45a_1_BC4_sorted.bed.bw2021-06-10 16:59 42K 
[ ]sj3_frac.sr_45b_1_BC6_sorted.bed.wig2021-06-10 16:59 37K 
[ ]sr_45b_1_BC6_sorted.bed.dat2021-06-10 16:59 99K 
[ ]sj3_frac.sr_45b_1_BC6_sorted.bed.bw2021-06-10 16:59 42K 
[ ]sj3_frac.sr_91a_1_BC7_sorted.bed.wig2021-06-10 16:59 22K 
[ ]sr_91a_1_BC7_sorted.bed.dat2021-06-10 16:59 81K 
[ ]sj3_frac.sr_91a_1_BC7_sorted.bed.bw2021-06-10 16:59 39K 
[ ]sj3_frac.sr_91a_2_BC8_sorted.bed.wig2021-06-10 16:59 32K 
[ ]sr_91a_2_BC8_sorted.bed.dat2021-06-10 16:59 93K 
[ ]sj3_frac.sr_91a_2_BC8_sorted.bed.bw2021-06-10 16:59 41K 
[ ]sj3_frac.sr_91b_1_BC9_sorted.bed.wig2021-06-10 16:59 26K 
[ ]sr_91b_1_BC9_sorted.bed.dat2021-06-10 16:59 87K 
[ ]sj3_frac.sr_91b_1_BC9_sorted.bed.bw2021-06-10 16:59 40K 
[TXT]allfractracks.txt2021-06-10 16:59 2.4K 
[ ]sj3_frac.sr_91b_2_BC10_sorted.bed.wig2021-06-10 16:59 39K 
[ ]sr_91b_2_BC10_sorted.bed.dat2021-06-10 16:59 101K 
[ ]sj3_frac.sr_91b_2_BC10_sorted.bed.bw2021-06-10 16:59 42K 
[ ]sj3_frac.sr_45_2_BC5_sorted.bed.wig2021-06-10 16:59 33K 
[DIR]fromhisat/2022-10-20 12:56 -  
Apache/2.4.52 (Ubuntu) Server at intron.ucsc.edu Port 80